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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873960.1_cds_XP_016435331.1_31303
CDS Infomation

[gene=LOC107761604] [db_xref=GeneID:107761604] [protein=polygalacturonase-like] [protein_id=XP_016435331.1] [location=complement(join(9710..9931,10002..10230,10403..10692,11163..11612))] [gbkey=CDS]
Sequence

ATGAAAATGGAGAACCCCATTTCTTCTCTTTTTCTTATTTCACTTCTCTCCATTTTCTTG
ACTGAAGCCATAGCTGATGTTGTGACAATATTAAATGTGCTGAATTTGGGGGCAAAGACA
GATGGAAAAACTGACTCAACAAAGGCTTTTTTAACTGCTTGGGCAGCAGCTTGTGGCTCT
TCAAAACCAGCCAACATATTTGTCCCACAAGGAAAGTATTTGGTTAAACAAGCACATTTT
AAAGGAAAATGCAAGAATAGAGCCATAACGTTCCAAATTGATGGCATACTCGTTGCACCC
TCTGATTATAATGTGATTGGAAATGCCAAAAATTGGCTTCTGTTTGAAGGTGTTGATGGA
GTTTCCATTCACGGTGGAATTCTTGATGGCCAAGGGACTAGTTTGTGGAGTTGCAAAGCC
TCGGGCAAGAACTGCCCGAGGGGCGCCACGACTCTGGGATTTTCCAACTCTAACAATGTA
GCAATAACAGAACTAACCTCATTGAACAGCCAAATGTTTCATATTGTCTTCAATGGGTGC
AAAAATGTGAAGTTGCAGGCCATTAAAGTTTTTGCCTCTGGCAAAAGCCCGAATACAGAT
GGCATTCACGTACAATTATCGTCTGATATTTCAATCTTGAACTCAAAAATCAGTACTGGA
GATGATTGCATATCCATCGGTTCAGGAACTACTAACTTGTGGATCCAAAATATAGCTTGT
GGCCCTGGCCATGGAATCAGCATTGGGAGTTTAGGCAAGGATTTTCAAGAAGCAGGGGTG
CAAAATGTGACAGTCAGATCAGTTATATTTAAGAACACACAAAATGGTGTGAGGATCAAA
ACATGGGGTAGACCAAGTACTGGCTTTGTCAAGAATGTTCTTTTCCAGCATGCTACAATG
ATTAACGTTCAAAATCCAATCGTTATTGATCAAAATTATTGTCCATATAACAAAAATTGT
CCCGGCCAGGTGTCAGGTGTGAAAATTAGTGATGTTACATATCAAGATATCTATGGAAGT
TCAGCAACACGAGTCGCAATGAAATTTGATTGCAGCAAAAGAAATCCATGCCAAGGAATA
AAATTGGAAGATGTACATCTCACTTATAAGAATCAACCAGCTGCTCAAGCTTCATGTGCT
AATGCTGCAGGAACAACTTCTGGCATAATTCAGCCTACCAGTTGTTTGTAA

Peptide Sequence

PEP ID

XP_016435331.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MKMENPISSLFLISLLSIFLTEAIADVVTILNVLNLGAKTDGKTDSTKAFLTAWAAACGS
SKPANIFVPQGKYLVKQAHFKGKCKNRAITFQIDGILVAPSDYNVIGNAKNWLLFEGVDG
VSIHGGILDGQGTSLWSCKASGKNCPRGATTLGFSNSNNVAITELTSLNSQMFHIVFNGC
KNVKLQAIKVFASGKSPNTDGIHVQLSSDISILNSKISTGDDCISIGSGTTNLWIQNIAC
GPGHGISIGSLGKDFQEAGVQNVTVRSVIFKNTQNGVRIKTWGRPSTGFVKNVLFQHATM
INVQNPIVIDQNYCPYNKNCPGQVSGVKISDVTYQDIYGSSATRVAMKFDCSKRNPCQGI
KLEDVHLTYKNQPAAQASCANAAGTTSGIIQPTSCL

Transcript Sequence

Gene sequence data has not been registered.